BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D10LP1|AL427484
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1688 999 0.0
3x_Contig1735 494 e-139
>3x_Contig1688
Length = 18058
Score = 999 bits (498), Expect = 0.0
Identities = 517/525 (98%), Gaps = 1/525 (0%)
Strand = Plus / Minus
Query: 444 caacaaaac-agagggagcagttgawatattttgtgaagccagaactacccagggatggt 502
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18054 caacaaaacnagagggagcagttgaaatattttgtgaagccagaactacccagggatggt 17995
Query: 503 tcatacagagcatttggtaatgtatggtaaattwaggatgaactaccggagttatcacag 562
||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 17994 tcatacagagcatttggtaatgtatgganaattaaggatgaactaccggagttatcacag 17935
Query: 563 atgggaattgaacaattatataggaaacgggaatctgtcacggaattggaaaacgggacc 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17934 atgggaattgaacaattatataggaaacgggaatctgtcacggaattggaaaacgggacc 17875
Query: 623 acaacagaagttgaacctagtcctcaagattcgcaaagtgggacaaattacgagaacaag 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17874 acaacagaagttgaacctagtcctcaagattcgcaaagtgggacaaattacgagaacaag 17815
Query: 683 atccaagagtcgaaaaaactaatgaaatcactattactaaatttcctagagcttatagga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17814 atccaagagtcgaaaaaactaatgaaatcactattactaaatttcctagagcttatagga 17755
Query: 743 atattgggagtggattcaagtagatatgagaaaaaacttgacgagataagggtgatagcc 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17754 atattgggagtggattcaagtagatatgagaaaaaacttgacgagataagggtgatagcc 17695
Query: 803 atcaatattcaccatcttcttaacgaatatagaccgcaccaaagtcgtgaatcgctaatc 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17694 atcaatattcaccatcttcttaacgaatatagaccgcaccaaagtcgtgaatcgctaatc 17635
Query: 863 atgttatttgaagaacaattggaacataaacgcaagghaatggaacacatcaataaagtc 922
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 17634 atgttatttgaagaacaattggaacataaacgcaaggaaatggaacacatcaataaagtc 17575
Query: 923 tgtkatgaagtgggatccaagctggctcaactgtgatatatatcc 967
||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 17574 tgtgatgaagtggaatccaagctggctcaactgtgatatatatcc 17530
>3x_Contig1735
Length = 19486
Score = 494 bits (246), Expect = e-139
Identities = 258/266 (96%)
Strand = Plus / Plus
Query: 3 caagagttatattcatatcacgtgaattcaaacatttgttacccggatgtgaaattgtac 62
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 19216 caagagtgatattcatatcacgtgaatacaaacatttgttacccggatgtgaaattgtac 19275
Query: 63 atgawatggaaatccaacttatagtaaccagcacaaacagaaacaagtgataaatcagtk 122
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19276 atgaaatggaaatccaacttatagtaaccagcacaaacagaaacaagtgataaatcagtg 19335
Query: 123 aacacaggaaagcgtgttggcgatatcagacctgtgttagacctccgtggccataatctg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19336 aacacaggaaagcgtgttggcgatatcagacctgtgttagacctccgtggccataatctg 19395
Query: 183 tccagattcaagataaactggaacctcgaccgtyctttaaagtattgawatccctctcaa 242
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 19396 tccagattcaagataaactggaacctcgaccgtcctttaaagtattgaaatccctctcaa 19455
Query: 243 taawakatttttttgaaagtgattgt 268
||| | ||||||||||||||||||||
Sbjct: 19456 taaaagatttttttgaaagtgattgt 19481
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6855
Number of Sequences: 1807
Number of extensions: 6855
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 2
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)